Use custom annotation in python script, prepare testing environment scripts

src/cclmwe/tests/custom_annotations/Dockerfile

+FROM clarinpl/python:3.6
+
+RUN apt-get update && apt-get install -y  \
+    libxml++2.6-dev \
+    libloki-dev \
+    libboost-all-dev \
+    libicu-dev \
+    libffi-dev \
+    libssl-dev \
+    libxml2-utils \
+    cmake \
+    swig \
+    pwrutils \
+    gdebi-core \
+   	antlr \
+   	libantlr-dev \
+   	default-jdk \
+   	git
+
+RUN mkdir -p /home/install
+WORKDIR /home/install
+
+RUN bash -c "wget -q -O - http://apt.clarin-pl.eu/KEY.gpg | apt-key add -"
+RUN bash -c "echo 'deb https://apt.clarin-pl.eu/ /' > /etc/apt/sources.list.d/clarin.list"
+
+# Install corpus2
+RUN apt-get update && apt-get install -y \
+    corpus2-python3.6
+
+# Install wccl from branch with change
+WORKDIR /home/install
+RUN git clone --single-branch \
+	--branch param_ann \
+	https://gitlab.clarin-pl.eu/analysers/wccl.git
+RUN mkdir wccl/src/build && \
+	cat wccl/src/libmwereader/mwereader.cpp && \
+    cd wccl/src/build && \
+    cmake .. && \
+    make -j 8 && \
+    make install && \
+    ldconfig
+
+# install corpus2mwe from this repository (branch param_ann)
+WORKDIR /home/install
+COPY ./ ./corpus2mwe
+RUN mkdir corpus2mwe/build && \
+    cd corpus2mwe/build && \
+    cmake .. && \
+    make -j 8 && \
+    make install && \
+    ldconfig
+
+RUN pip install corpus_ccl

src/cclmwe/tests/custom_annotations/test.sh

+#!/bin/bash
+
+# docker build ../../.. -t corpus2mwe_wccl_param_ann -f Dockerfile
+docker run --rm corpus2mwe_wccl_param_ann bash -c '
+cd corpus2mwe/tools
+echo "Without setting annotation name:"
+python mwe_converter.py -c /home/install/corpus2mwe/cclmwe/tests/testdata/ccl.xml \
+	-o /home/install/corpus2mwe/cclmwe/tests/testdata/ccl_out.xml 
+cat /home/install/corpus2mwe/cclmwe/tests/testdata/ccl_out.xml
+echo "With annotation test_ann:"
+python mwe_converter.py -c /home/install/corpus2mwe/cclmwe/tests/testdata/ccl.xml \
+	-o /home/install/corpus2mwe/cclmwe/tests/testdata/ccl_out2.xml \
+	-a test_ann
+cat /home/install/corpus2mwe/cclmwe/tests/testdata/ccl_out2.xml
+'
\ No newline at end of file

src/tools/mwe_converter.py

@@ -11,21 +11,25 @@ def parser():
     aparser.add_argument('-o', '--output', dest='out_file', required=True)
     aparser.add_argument('-m', '--mwe_merged', action='store_false')
     aparser.add_argument('-t', '--tagset', default='nkjp')
+    aparser.add_argument('-a', '--annotation', default='mwe',
+            help='Name of annotation to set')
     return aparser
 
 
 class MWEConverter(object):
 
-    def __init__(self, tagset='nkjp'):
+    def __init__(self, tagset='nkjp', annotation='mwe'):
         self.reader = None
         if tagset:
             self.tagset = ccl.get_tagset(tagset)
         else:
             self.tagset = ccl.get_tagset('nkjp')
+        self.annotation = annotation
 
     def convert(self, ccl_file, out_mwe_file, annots_used=False):
         if not self.reader:
-            self.reader = mwe.CclMWEReader(ccl_file, self.tagset)
+            self.reader = mwe.CclMWEReader(ccl_file, self.tagset, '', 
+                    self.annotation)
             self.reader.use_annotations(annots_used)
         else:
             self.reader.set_files(ccl_file)
@@ -37,7 +41,7 @@ def main(argv=None):
     aparser = parser()
     args = aparser.parse_args(argv)
 
-    converter = MWEConverter(tagset=args.tagset)
+    converter = MWEConverter(tagset=args.tagset, annotation=args.annotation)
     converter.convert(args.ccl_file, args.out_file, args.mwe_merged)